Some of these compilations may link to each other, and some may conflate violence by men claiming to be transgender with violence by men who are merely cross-dressers or the like. For more precise sources, head over to primary sources.
http://womanmeanssomething.com/violencedatabase/
https://allisonslaw.wordpress.com/
Frequently documents reports of violence by transgender males. From what I can tell, it's careful to only include reports of men who seem to show some amount of genuineness in their trans identification.
http://anti-female-receipts.tumblr.com/
We gather receipts of violence against radical feminists, lesbian feminists, gender critical feminists or any females who contradict 3rd wave feminism or trans activism as well as any violence against women
Many (if not most) of the links on this page don't have anything to do with transgender, some are broken links, and so on.
https://outofmypantiesnow.wordpress.com/2013/10/28/when-is-90-not-substantially-all/
The above repeated:
https://genderidentitywatch.com/transwomen-sexualized-violence/